Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., peptidyl-prolyl cis-trans isomerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 88/389 (22%), Positives = 168/389 (43%), Gaps = 47/389 (12%)

Query: 11  VLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQP----LPQET 66
           VL+       +A+   +D V  +V    IL+SDV+ A      N ++ +      +P+E 
Sbjct: 14  VLAVFANVVTYAQDNVIDEVVWVVGDEAILKSDVEEARMDALYNGRRFEGDPYCVIPEEI 73

Query: 67  VLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLT 126
            +++  L +  +D+++  EA+ I  +  D   N  I++I  + ++ +E    +  Q   T
Sbjct: 74  AVQKLFLHQAKLDSIEVSEAEII--QRVDMMTNMYIQQIG-SKEKMEEYFNKTATQIRET 130

Query: 127 YPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQET----DATVQYKISHIQ 182
               RE  R  +     +  LV   I + PAEV    + L Q++       V+ +I  +Q
Sbjct: 131 ---LRENARDGLTVQKMQQKLVGD-IKVTPAEVRRYFKDLPQDSIPYIPTQVEVQIITLQ 186

Query: 183 LRVDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGP-KALQGGDWGWMRKEEMPTI 241
            ++   + +     L +      +   DF+ +A  YS+    A++GG+  +M +  +   
Sbjct: 187 PKIPIAEIEDVKRRLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGELDFMGRGMLDPA 246

Query: 242 FAD-QIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300
           +A+    +Q+   +     S  G+HI+++ + +G        VN RHIL++P +      
Sbjct: 247 YANVAFSLQDPKKVSKIVESEFGYHIIQLIEKRG------DRVNTRHILLRPKV------ 294

Query: 301 AQKQLNEFVQR-------IKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
           ++K+L E   R       I+  + TF E A   SQD  +    G +        +   K 
Sbjct: 295 SEKELTEACARLDSIGDDIRQNKFTFDEAASVISQDKDTRNNHGLMVNTNERTGITTSKF 354

Query: 354 QIETLP-----------VGQISEPFKTVH 371
           Q++ LP           VG+IS  F  ++
Sbjct: 355 QMQDLPQDVAKVVDKMNVGEISRAFTMIN 383



 Score = 55.1 bits (131), Expect = 5e-12
 Identities = 28/104 (26%), Positives = 63/104 (60%), Gaps = 2/104 (1%)

Query: 281 TEVNARHILIKPTIILSD-EGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGEL 339
           T+V  + I ++P I +++ E  +++L ++  R+  GE+ F+ LA+ YS+D  SA + GEL
Sbjct: 176 TQVEVQIITLQPKIPIAEIEDVKRRLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGEL 235

Query: 340 GYQTPDLYVPEFKHQIETL-PVGQISEPFKTVHGWHIVEVLDRR 382
            +    +  P + +   +L    ++S+  ++  G+HI++++++R
Sbjct: 236 DFMGRGMLDPAYANVAFSLQDPKKVSKIVESEFGYHIIQLIEKR 279