Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) from Shewanella sp. ANA-3

 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 95/370 (25%), Positives = 156/370 (42%), Gaps = 60/370 (16%)

Query: 28  DSVAVIVNSGVILQSDVDSALKTIKANAKQNKQPL-----PQETVL---REQVLEKLIID 79
           D  A  VN   I +++++ A ++ +A  +Q    +       E  L   ++ VLE+L+ D
Sbjct: 39  DVPAAEVNGDKITKAELEQAYQSERARMEQQLGEMFAALSADERYLESIKQSVLERLVAD 98

Query: 80  TLQQQEADRIGVKIDDNRLNEAIKE---IAKNNQQTQEQLIASVAQEGLTYPEFREQVRK 136
            L  Q A  +G+++ D ++  AIK       + +   ++  A + Q G     FR  +R 
Sbjct: 99  KLIDQAAAAMGLRVSDEQIITAIKSEPAFQTDGKFDNDRYQAILRQLGYQPQTFRSMMRV 158

Query: 137 EMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH-----IQLRVDDGQDK 191
           +M       ALV     +LP E   LAEL  Q  D  ++Y +           V D Q K
Sbjct: 159 DMTRRQLTAALVGTEF-VLPGEAKQLAELQGQTRD--IRYLVVDSAPFLANASVTDEQVK 215

Query: 192 STAETLANKLVNDLRNGADFAQMAYA-YSKGPKALQGGDWGWMRKEEMPTIFADQIKMQN 250
           +  +T   + ++  +   ++ ++  A ++K  K            +E    + D+ K Q 
Sbjct: 216 NYYDTNQGQFMSPEKVSLEYVELNAADFAKDSKVT----------DEEAQAYYDEHKTQY 265

Query: 251 KGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQ 310
                             + + K L         A HILI P    SDE A K   E + 
Sbjct: 266 ------------------VSNEKRL---------AAHILIGPG---SDEAAAKAKAEDLA 295

Query: 311 RIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTV 370
           +  +    FAELA+  S+D  SA Q G+L +  P +  P F   +  L  GQ S   KT 
Sbjct: 296 KQLDNGADFAELAKANSEDTLSAEQGGKLDWFEPGVMDPSFDTALFALQKGQHSAVVKTD 355

Query: 371 HGWHIVEVLD 380
            G+HI+++LD
Sbjct: 356 FGFHIIKLLD 365



 Score = 55.8 bits (133), Expect = 4e-12
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 1/103 (0%)

Query: 185 VDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGP-KALQGGDWGWMRKEEMPTIFA 243
           +  G D++ A+  A  L   L NGADFA++A A S+    A QGG   W     M   F 
Sbjct: 278 IGPGSDEAAAKAKAEDLAKQLDNGADFAELAKANSEDTLSAEQGGKLDWFEPGVMDPSFD 337

Query: 244 DQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNAR 286
             +    KG      ++  GFHI+K+ DV+   TV   +V A+
Sbjct: 338 TALFALQKGQHSAVVKTDFGFHIIKLLDVQPGTTVPFADVKAK 380