Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) from Pseudomonas fluorescens FW300-N2E2

 Score =  270 bits (690), Expect = 2e-77
 Identities = 141/255 (55%), Positives = 174/255 (68%)

Query: 9   HKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIELD 68
           H+ARKRFGQNFL+D  +ID I+ +I  KP   L+EIGPG GA+TE +     +  V+ELD
Sbjct: 7   HRARKRFGQNFLHDAGVIDRILRSIRAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVELD 66

Query: 69  RDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFHLFEF 128
           +DL   L       S  ++H+GDA++FDF  L    N LRV GNLPYNISTPL+FHL   
Sbjct: 67  KDLVPILNQQFAGRSNFSLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLSN 126

Query: 129 HRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDS 188
              I+DMHFMLQKEVV RLAAGPG   +GRL++M QY+C+V  +  V P AF PPPKVDS
Sbjct: 127 AGLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDS 186

Query: 189 AVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETLGINPGMRP 248
           A+VRLVP+  LPHPA     L+RVVRE FNQRRKT+RN  K L     +E  G++  +RP
Sbjct: 187 AIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKLLLSSTEIEAAGVDGSLRP 246

Query: 249 ENLTLAQFVALANWL 263
           E L LA FV LA+ L
Sbjct: 247 EQLDLAAFVRLADKL 261