Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., dimethyladenosine transferase from Pseudomonas stutzeri RCH2

 Score =  270 bits (690), Expect = 2e-77
 Identities = 139/255 (54%), Positives = 175/255 (68%)

Query: 9   HKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIELD 68
           H+ARKRFGQNFL+D  +I  I+ AI+ KPG+ LVEIGPG GA+TE +        V+ELD
Sbjct: 6   HRARKRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTEGLLDSGAHLDVVELD 65

Query: 69  RDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFHLFEF 128
            DL   L+         T+H+GDA++FDF +L    N LR+ GNLPYNISTPL+FHL   
Sbjct: 66  LDLIPILQGKFAERDNFTLHQGDALKFDFSRLSAEPNSLRIVGNLPYNISTPLIFHLLAH 125

Query: 129 HRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDS 188
              I+DMHFMLQKEVV RLAA PG   +GRL++M QY+C+V  +  V P AF P PKVDS
Sbjct: 126 AHLIRDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDS 185

Query: 189 AVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETLGINPGMRP 248
           A+VRLVP+E LPHPA     L+RVVRE FNQRRKT+RN  KGL + + +    ++  +RP
Sbjct: 186 AIVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLKGLLDADAIAAADVDGSLRP 245

Query: 249 ENLTLAQFVALANWL 263
           E L LA FV L++ L
Sbjct: 246 EQLDLAAFVRLSDQL 260