Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., dimethyladenosine transferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  354 bits (908), Expect = e-102
 Identities = 175/263 (66%), Positives = 205/263 (77%)

Query: 1   MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVD 60
           M N VHLGH ARKRFGQNFL D  II+ IV AI+P     +VEIGPGL A+TEPV   + 
Sbjct: 1   MSNKVHLGHTARKRFGQNFLTDGNIINRIVGAISPDDDHVMVEIGPGLAALTEPVAMGIK 60

Query: 61  KFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTP 120
             TVIELDRDLAERL+ HP L  KLTIH+GDAM+FDF QLV+P  KL+VFGNLPYNISTP
Sbjct: 61  NLTVIELDRDLAERLKVHPTLKDKLTIHQGDAMKFDFSQLVEPERKLKVFGNLPYNISTP 120

Query: 121 LMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAF 180
           LMFHLFEF   I++MHFMLQKEVV RL+A PGTKAYG+LTVMAQYYC+VVPVLEVPP  F
Sbjct: 121 LMFHLFEFAEHIENMHFMLQKEVVLRLSASPGTKAYGKLTVMAQYYCQVVPVLEVPPGCF 180

Query: 181 VPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETL 240
            PPPKVDSAVVRLVPY + P P   +E L +V    FN RRKT+RN  K L +    + L
Sbjct: 181 TPPPKVDSAVVRLVPYAEKPWPCHDVEMLRKVCNTAFNMRRKTLRNNLKPLLQDADFDVL 240

Query: 241 GINPGMRPENLTLAQFVALANWL 263
           GI+ G+RPE++++AQ+VA+AN+L
Sbjct: 241 GIDAGLRPEDISVAQYVAMANYL 263