Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., dimethyladenosine transferase KsgA from Phaeobacter inhibens DSM 17395

 Score =  128 bits (322), Expect = 1e-34
 Identities = 97/264 (36%), Positives = 136/264 (51%), Gaps = 18/264 (6%)

Query: 11  ARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIELDRD 70
           ARK  GQNFL D  +   I          +++EIGPG G +T  +  E  +  V+ +++D
Sbjct: 21  ARKSLGQNFLLDLNLTAKIARQAGDLSECDVLEIGPGPGGLTRGLLAEGAR-RVLAVEKD 79

Query: 71  ------LAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFH 124
                 LAE    +P    +L + EGDA+  +   L      +R+  NLPYN+ T L+  
Sbjct: 80  SRCIPALAEISDAYP---GRLQVIEGDAL--EVNPLTHLTPPIRIAANLPYNVGTELLVR 134

Query: 125 LFE---FHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFV 181
                 +    Q +  M Q+EV  R+ A PG+KAYGRL ++AQ+      VL +PP AF 
Sbjct: 135 WLTPKAWPPFWQSLTLMFQREVAERIVAVPGSKAYGRLALLAQWRADARIVLSLPPEAFS 194

Query: 182 PPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAE--PETLET 239
           PPPKV SAVV L   E   +PA +   L++VV   FNQRRK +R   K ++    + L  
Sbjct: 195 PPPKVHSAVVHLKALEAPRYPADA-GTLNKVVAAAFNQRRKMLRASLKSVSPDIEDHLNA 253

Query: 240 LGINPGMRPENLTLAQFVALANWL 263
           +GI P  R E + L  F ALA  L
Sbjct: 254 VGIPPTERAEQVGLEAFCALARSL 277