Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., dimethyladenosine transferase (RefSeq) from Shewanella loihica PV-4

 Score =  343 bits (879), Expect = 3e-99
 Identities = 166/263 (63%), Positives = 201/263 (76%)

Query: 1   MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVD 60
           M N VHLGH ARKRFGQNFL D  +I+ IV AI+P     +VEIGPGL A+TEPV   +D
Sbjct: 1   MSNKVHLGHTARKRFGQNFLTDSNVINRIVGAISPDNDHVMVEIGPGLAALTEPVAESID 60

Query: 61  KFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTP 120
           K TV+ELD+DL ERL+ HP L  KL IH+GDA++FDFKQLV+   +++VFGNLPYNISTP
Sbjct: 61  KLTVVELDKDLVERLQTHPFLKDKLEIHQGDALKFDFKQLVEEGKQMKVFGNLPYNISTP 120

Query: 121 LMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAF 180
           LMFHLFEF   I++MHFMLQKEVV RL+A PGTKAYGRLTVMAQY+C+V+PVLEVPP  F
Sbjct: 121 LMFHLFEFAEHIENMHFMLQKEVVLRLSAAPGTKAYGRLTVMAQYFCQVMPVLEVPPGCF 180

Query: 181 VPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETL 240
            PPPKVDSAVVRLVPY++ P+P   ++ L  +    FN RRKT+RN  K L   +    L
Sbjct: 181 TPPPKVDSAVVRLVPYKEKPYPCKDVDLLRHLCTTAFNMRRKTLRNNLKQLLNDDDFSAL 240

Query: 241 GINPGMRPENLTLAQFVALANWL 263
           GI+  MRPE +T+ Q+VA+AN L
Sbjct: 241 GIDASMRPEQITVQQYVAMANHL 263