Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., dimethyladenosine transferase from Dechlorosoma suillum PS

 Score =  245 bits (626), Expect = 6e-70
 Identities = 138/256 (53%), Positives = 171/256 (66%), Gaps = 6/256 (2%)

Query: 9   HKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIELD 68
           H ARKRFGQNFL DP I+  IV A+NP     +VEIGPGLGA+T P+   VD   V+E+D
Sbjct: 3   HIARKRFGQNFLQDPQIVADIVGAVNPPRDGQVVEIGPGLGALTVPLMARVDHLHVVEID 62

Query: 69  RDLAERLRN-HPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFHLFE 127
           RDL  RL+  +P+   KLTIHEGDA+ FDF QL  PN  L++ GNLPYNISTPL+FHL  
Sbjct: 63  RDLIARLKKQYPK--DKLTIHEGDALEFDFGQL-GPN--LQIVGNLPYNISTPLLFHLAS 117

Query: 128 FHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVD 187
           F   ++DMHFMLQKEVV R+ A PG   Y RL+VM QY   +  +L+VPP +F P PKVD
Sbjct: 118 FAPMVRDMHFMLQKEVVERMVALPGESEYSRLSVMLQYRFYMDWLLDVPPESFDPAPKVD 177

Query: 188 SAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETLGINPGMR 247
           SAVVRL+P       A     L++VV+  F+QRRK +RN  K L     LE  GI P  R
Sbjct: 178 SAVVRLIPRPQEELTAKDPALLEKVVQAAFSQRRKMLRNTLKELGGEAWLEAHGIKPTAR 237

Query: 248 PENLTLAQFVALANWL 263
            E++ +A ++ALAN L
Sbjct: 238 AEDVPVADYIALANSL 253