Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., dimethyladenosine transferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  138 bits (347), Expect = 1e-37
 Identities = 95/261 (36%), Positives = 138/261 (52%), Gaps = 13/261 (4%)

Query: 8   GHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIEL 67
           G +A+K  GQNFL D  I   IV+A+   P   ++EIGPG GA+T  +        +  L
Sbjct: 9   GPRAKKSLGQNFLRDRNIAAKIVAALRIGPEDRVIEIGPGPGALTRHI-HAAGPAQLFLL 67

Query: 68  DRDL---AERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFH 124
           ++D     E  R  P     +T    DA+ F +++L    +  +V GNLPYN+++PLM+ 
Sbjct: 68  EKDYHWATEHGRTRPAEPPVITPVLTDALLFPWERLTSARS-WKVIGNLPYNVASPLMWD 126

Query: 125 LFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLE--VPPSAFVP 182
           +      +    FM+QKEV  R+ A PG+ AYG L+V  Q +  V P +E  VPP  FVP
Sbjct: 127 ILSTAPGLARAVFMIQKEVGERIVAAPGSGAYGALSVWLQSF--VTPRMEFIVPPQVFVP 184

Query: 183 PPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAE---PETLET 239
            PKVDSAV+  VP             L R+++  F QRRK ++   +G  +   P  L  
Sbjct: 185 RPKVDSAVLSFVPL-GAARGRFDPARLSRLLKVCFQQRRKQLQRILRGYVQGDVPALLAG 243

Query: 240 LGINPGMRPENLTLAQFVALA 260
           LG++P +RPE+L    F  L+
Sbjct: 244 LGLDPAVRPESLAPEDFHMLS 264