Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase from Klebsiella michiganensis M5al

 Score =  356 bits (913), Expect = e-103
 Identities = 177/270 (65%), Positives = 205/270 (75%), Gaps = 1/270 (0%)

Query: 1   MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVD 60
           M N VH GH ARKRFGQNFLND ++ID IVSAINP+ GQ +VEIGPGL A+TEPVG  +D
Sbjct: 1   MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAIVEIGPGLAALTEPVGERLD 60

Query: 61  KFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNK-LRVFGNLPYNIST 119
           + TVIELDRDLA RL+ HP L  KLTI++ DAM  +F +L +   + LRVFGNLPYNIST
Sbjct: 61  QLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSQSMGQPLRVFGNLPYNIST 120

Query: 120 PLMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSA 179
           PLMFHLF +   I DMHFMLQKEVVNRL AGP +KAYGRL+VMAQYYC+++PVLEVPPSA
Sbjct: 121 PLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQIIPVLEVPPSA 180

Query: 180 FVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLET 239
           F PPPKVDSAVVRLVPY  LPHP   +  L R+  E FNQRRKT+RN    L   E L  
Sbjct: 181 FTPPPKVDSAVVRLVPYRTLPHPVKEVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTE 240

Query: 240 LGINPGMRPENLTLAQFVALANWLDATHKT 269
           LGI+P  R EN+++AQ+  LANWL     T
Sbjct: 241 LGIDPAKRAENISVAQYCQLANWLSENAPT 270