Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., dimethyladenosine transferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  138 bits (348), Expect = 1e-37
 Identities = 93/255 (36%), Positives = 136/255 (53%), Gaps = 7/255 (2%)

Query: 10  KARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPV-GREVDKFTVIELD 68
           +A+K  GQNFL D  I   I + ++  P   ++EIGPG GA+T  +      +  ++E D
Sbjct: 4   RAKKSLGQNFLKDRNIAARIAAQLHIGPDDWVIEIGPGPGALTRHIHAAGPARLFLLEKD 63

Query: 69  RDLAERLRNHPELAS-KLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFHLFE 127
              A   R HP   + +  +   DA+ F +++L    +  +V GNLPYN+++PLM+ +  
Sbjct: 64  HHWAREHRLHPLAGTPEAQVVLTDALLFPWERL-DAAHPWKVIGNLPYNVASPLMWDICS 122

Query: 128 FHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVD 187
               +    FM+QKEV  R+ A PG++ YG L+V  Q + K      VPP  F P PKVD
Sbjct: 123 RAPGLLRASFMIQKEVGERIVAAPGSRQYGALSVWLQCFTKPEWCFVVPPHVFTPRPKVD 182

Query: 188 SAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYK---GLAEPETLETLGINP 244
           SAV+   P  D P  A   + L RV+R  F QRRK ++   +   G      L  LGI+P
Sbjct: 183 SAVLAFTPRTDRP-DAVQSKRLARVLRLCFQQRRKQLQGILRPHVGGDASALLAGLGIDP 241

Query: 245 GMRPENLTLAQFVAL 259
             RPE L+  +F+AL
Sbjct: 242 AARPETLSPERFIAL 256