Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., dimethyladenosine transferase (RefSeq) from Shewanella sp. ANA-3

 Score =  343 bits (880), Expect = 2e-99
 Identities = 168/261 (64%), Positives = 199/261 (76%)

Query: 1   MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVD 60
           M + VHLGH ARKRFGQNFL D  +I+ IV AI P     +VEIGPGLGA+TEPV   +D
Sbjct: 1   MSSKVHLGHTARKRFGQNFLTDDNVINRIVGAIVPDNDHVMVEIGPGLGALTEPVATAID 60

Query: 61  KFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTP 120
             TV+ELDRDL ERL+NHP L  KLTIH+GDA++FDF QLV P  KL+VFGNLPYNISTP
Sbjct: 61  NLTVVELDRDLVERLQNHPVLKDKLTIHQGDALQFDFSQLVVPGKKLKVFGNLPYNISTP 120

Query: 121 LMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAF 180
           LMFHLFEF   I+ MHFMLQKEVV RL+A PG KAYGRLTVMAQY+C+VVPVLEVPP +F
Sbjct: 121 LMFHLFEFAEQIETMHFMLQKEVVLRLSASPGNKAYGRLTVMAQYFCQVVPVLEVPPHSF 180

Query: 181 VPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETL 240
            PPPKVDSAVVRL+PY + P P   +  L ++    FN RRKT+RN  K +   E  E L
Sbjct: 181 APPPKVDSAVVRLLPYAEKPFPCKDVNVLRQLCTTAFNMRRKTLRNNLKQVLSDEEFEQL 240

Query: 241 GINPGMRPENLTLAQFVALAN 261
           GI+P +RPE +++ Q+VA+AN
Sbjct: 241 GIDPNLRPEQISVEQYVAMAN 261