Pairwise Alignments

Query, 289 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., Probable conserved transmembrane protein from Mycobacterium tuberculosis H37Rv

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 11/254 (4%)

Query: 35  GIMESKQRAVSRLIAQAGQMLLAHGAESTLVGDIMRRMGLASGMSEVEVSLSASSLVVTT 94
           GI +   R V  L  +  +++L+ G+ +  V    + +  A  +++  V ++ ++++V+ 
Sbjct: 38  GIDDLHTRKVLDLTIRLAEVMLSSGSGTADVVATAQDVAQAYQLTDCVVDITVTTIIVSA 97

Query: 95  VYKEHC--ITTARRSPDRGINMRVVTQIQRICIMMEKGILDHSLAQRKLNHIS--PERYN 150
           +       +T  R    R  +   + ++ R+   +  G +    A   ++ ++  P  Y 
Sbjct: 98  LATTDTPPVTIMRSVRTRSTDYSRLAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYP 157

Query: 151 RWLVVVMIGLSCAAFSRLAGGDWMVFLITLIASSVGMIVRQ-EIGHRQFNPLINFAATAF 209
           RWL            + L GG W+  ++  + S  G+I R   + +R   PL  F    F
Sbjct: 158 RWLATAGAAGFALGVAMLLGGTWLTCVLAAVTS--GVIDRLGRLLNRIGTPL--FFQRVF 213

Query: 210 VTSVISAQAVIYQL--GNKPTIVMASSVLMLVPGFPLINAVADMLKGYINMGIARFVMAS 267
              + +  AV   L  G  PT ++A+ +++L+ G  L+ ++ D + GY+   +AR   A 
Sbjct: 214 GAGIATLVAVAAYLIAGQDPTALVATGIVVLLSGMTLVGSMQDAVTGYMLTALARLGDAL 273

Query: 268 LLTLATALGIVAAM 281
            LT    +GI+ ++
Sbjct: 274 FLTAGIVVGILISL 287