Pairwise Alignments

Query, 390 a.a., GTPase ObgE from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., GTP-binding protein, GTP1/Obg family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  516 bits (1330), Expect = e-151
 Identities = 254/391 (64%), Positives = 314/391 (80%), Gaps = 5/391 (1%)

Query: 1   MKFVDEAVIKVQAGDGGNGVVSFWREKFVTNGGPDGGDGGDGGDVYMVADENLNTLIDYR 60
           MKFVDEAVI+V+AGDGG+G VSF REK++ +GGPDGGDGGDGG VY+ ADEN NTLI+YR
Sbjct: 1   MKFVDEAVIRVEAGDGGSGCVSFRREKYIPDGGPDGGDGGDGGSVYLEADENFNTLIEYR 60

Query: 61  FQRFYEAERGKNGGGGNCTGKSGKDKELRVPVGTRAVDIHTNEIIGEVAEHGKKVMIAKG 120
           F+RF+ AERG+NG G +CTG SGKD  L+VPVGTRA+D  T E++G++  HG+K+++AKG
Sbjct: 61  FERFHMAERGENGRGRDCTGHSGKDLILKVPVGTRAIDHDTEEVLGDLTTHGQKLLVAKG 120

Query: 121 GWHGLGNARFKSSVNRSPRQKTLGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVS 180
           G+HGLGN RFKSS NR+PRQKTLGT GE+R ++LELLLLADVG+LGMPNAGKSTFIRAVS
Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELLLLADVGLLGMPNAGKSTFIRAVS 180

Query: 181 AAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240
            A PKVADYPFTTLVP+LGVV+  P +S+V+ADIPGLIEGAAEGAGLGIRFLKHLERCR+
Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSYVIADIPGLIEGAAEGAGLGIRFLKHLERCRI 240

Query: 241 LLHMIDIMPADQSDPAHNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEEEADEIIQNI 300
           LLH+IDI P D +DP  +A  I+ ELE+YS KLA KPRWLVFNK DL+ E+E  E  + +
Sbjct: 241 LLHIIDIEPIDGTDPVDSARAIVGELEKYSPKLASKPRWLVFNKADLLLEDELKEKAERV 300

Query: 301 IDALAWEGDYFKISAANRQGTKELCMKLAEFMDTLPREAEEKTEAEKVDFTWDYNHKDGL 360
           +  L WEG+ + ISA  R GTKEL  KL +F+ +LP E ++    ++V+F WD  H+   
Sbjct: 301 VKELGWEGEVYTISAYGRDGTKELAAKLWDFIQSLPPEDKDANPEDEVEFKWDNYHQ--- 357

Query: 361 AGREVITED-DDDW-DDWDDEEDDGHVIYVR 389
           A  + I ED DDD+ DD+DD++ D  VIY R
Sbjct: 358 ANIDAINEDYDDDFDDDFDDDDYDVEVIYQR 388