Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., geranyltranstransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  111 bits (277), Expect = 2e-29
 Identities = 70/241 (29%), Positives = 122/241 (50%), Gaps = 10/241 (4%)

Query: 43  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100
           GGKR+RP L     + LG   +     AA +E +H  +L+HDD+  +D+ +LRRGK T +
Sbjct: 42  GGKRIRPFLVYAVGELLGVDKAKLDRLAAAVECVHAYSLIHDDLPAMDDDNLRRGKPTVH 101

Query: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-------MKILKLMSDAVNVIAEGEVQQLMNC 153
            AF  A ++L GD + T +F++++E  +       + ++  ++ A   +     Q L   
Sbjct: 102 IAFDEATAILAGDALQTLAFEIISESDAGLAPKAQVAMIAALARASGYLGMCGGQALDLA 161

Query: 154 NDPDTTEASYMQVIYS-KTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDD 212
            +  +     +  +++ KT  L  AA ++  I  DAS     A++ Y   +G AFQ+ DD
Sbjct: 162 GEGKSISLDELTRLHNLKTGALIRAAVELALIAADASDADTAALRAYADAIGLAFQVQDD 221

Query: 213 VMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEIL 272
           ++D T+  +E+GK  G DL   K T P L  +        A++ +A+     M   +++L
Sbjct: 222 ILDITATTEEIGKPQGSDLDANKSTYPKLLGLDGARQTADALVADALSALAKMPYNSQLL 281

Query: 273 A 273
           A
Sbjct: 282 A 282