Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., polyprenyl synthetase family protein from Rhodanobacter denitrificans MT42

 Score =  343 bits (880), Expect = 3e-99
 Identities = 177/321 (55%), Positives = 232/321 (72%), Gaps = 1/321 (0%)

Query: 2   DFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGY 61
           DF  ++ L A DM +V+  I  +L+SDV LINQ+  +II+GGGKRLRP+L VL+A A GY
Sbjct: 13  DFAQVRDLAAADMQRVDALIRRRLSSDVVLINQIADHIIAGGGKRLRPMLHVLAAGAAGY 72

Query: 62  QGSHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQ 121
           +G HH   AA IEFIHT+TLLHDDVVDESDLRRG+ TANA +GNAASVLVGDF+Y+RSFQ
Sbjct: 73  RGEHHVKLAAIIEFIHTSTLLHDDVVDESDLRRGRKTANALWGNAASVLVGDFLYSRSFQ 132

Query: 122 MMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQI 181
           +M EL  M+I+++++D  N IAEGEV QL+N  + D  EA+Y+ VI  KTA LF AAT++
Sbjct: 133 LMVELDDMRIMRILADTTNTIAEGEVLQLLNIGNADVGEAAYLAVIERKTAVLFAAATEL 192

Query: 182 GAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLL 241
           G IL         A++ YG  LG AFQ+ DD++DYTSD   +GKN+GDDLAEGKPTLPL+
Sbjct: 193 GGILGGLPEGQVTALREYGMQLGYAFQIADDLLDYTSDAGTLGKNIGDDLAEGKPTLPLI 252

Query: 242 YAMQHGNPEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAI 301
           YA++  +PEQA  +R AIE   G+  L+ I+AA+  +G+L+ T ++AL  A  A   L  
Sbjct: 253 YALERASPEQAQSLRHAIEH-GGLDSLDRIVAAIRDSGALERTRDRALRHARAASEALTA 311

Query: 302 LPESEYKQALITLAHMAVNRS 322
           LP S ++ AL TLA  +V R+
Sbjct: 312 LPPSAHRDALATLAEYSVQRT 332