Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., octaprenyl-diphosphate synthase IspB from Phaeobacter inhibens DSM 17395

 Score =  238 bits (607), Expect = 2e-67
 Identities = 137/319 (42%), Positives = 192/319 (60%), Gaps = 4/319 (1%)

Query: 6   IQALTANDMAKVNETIHAQLNSD-VSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGS 64
           + A  +++MA VN  I  ++ S     I ++  +++  GGKRLRP+L + +A+  GY G 
Sbjct: 13  LAATLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSGD 72

Query: 65  HHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMT 124
           +H   AA +EFIHTATLLHDDVVDES  RRG+ TAN  + N +SVLVGD+++ RSFQ+M 
Sbjct: 73  NHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMV 132

Query: 125 ELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAI 184
           E GS+++L ++++A   IAEGEV Q+   +D  T E  Y+QV+  KTA LF AATQ G +
Sbjct: 133 ETGSLRVLDILANASATIAEGEVLQMTAASDLATDEGIYLQVVRGKTAALFSAATQAGGV 192

Query: 185 LCDASPEVEL-AMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243
           + +A PE ++ A+  YG  LG AFQ+ DD++DY  D    GKNVGDD  E K TLP++ A
Sbjct: 193 VANA-PETQIDALFAYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIKA 251

Query: 244 MQHGNPEQAAMIREAIEKA-NGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 302
           +     E+       IEK       L+  LA M++  +L  T   A+    KA   L  L
Sbjct: 252 VAQATAEERGFWVRTIEKGRQDEGDLDHALALMDKYDTLTATRHDAMDWVAKAQNALTAL 311

Query: 303 PESEYKQALITLAHMAVNR 321
           P+   +Q L  LA   V R
Sbjct: 312 PDDPIRQMLHDLADYVVAR 330