Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., polyprenyl synthetase (RefSeq) from Shewanella loihica PV-4

 Score = 99.8 bits (247), Expect = 7e-26
 Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 12/242 (4%)

Query: 43  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100
           GGKR+RP L     + LG         AA IE IH  +L+HDD+  +D+  LRRG+ T +
Sbjct: 42  GGKRIRPFLVYAVGEMLGVPLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVH 101

Query: 101 AAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAE---------GEVQQLM 151
            AF  A ++L GD + T +F+++++ G           V  +A+         G+   L 
Sbjct: 102 IAFNEATAILAGDALQTLAFEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAMDL- 160

Query: 152 NCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLID 211
           N  D      +  ++   KT  L   A ++  I    + E    +  +   +G AFQ+ D
Sbjct: 161 NATDRQIDLETLKRLHRLKTGALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQVQD 220

Query: 212 DVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEI 271
           DV+D  +  +E+GK  G D    K T P L  +        ++I +A+     +   +++
Sbjct: 221 DVLDIIASTEELGKPQGSDCESNKSTYPKLLGLSGAQATAKSLIEDALSALAKLPYNSQL 280

Query: 272 LA 273
           +A
Sbjct: 281 IA 282