Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., Probable multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 (GGPP synthetase) (ggppsase) (geranylgeranyl diphosphate synthase): dimethylallyltransferase (prenyltransferase) (geranyl-diphosphate synthase) + geranyltranstransferase (farnesyl-diphosphate synthase) (farnesyl-pyrophosphate synthetase) (farnesyl diphosphate synthetase) (FPP synthetase) + farnesyltranstransferase (geranylgeranyl-diphosphate synthase) from Mycobacterium tuberculosis H37Rv

 Score =  115 bits (288), Expect = 2e-30
 Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 8/286 (2%)

Query: 44  GKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAF 103
           GK +RP L  ++A+A G         A  +E +H  +L+HDD++D  + RR + T  A +
Sbjct: 72  GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRHRPTVWALW 131

Query: 104 GNAASVLVGDFIYTRSFQMMTELGSMKI---LKLMSDAVNVIAEGEVQQLMNCNDPDTTE 160
           G+A ++L GD + + + +++ +  S  +   L+ +S+A   +  G+       +  D   
Sbjct: 132 GDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFESRTDVAL 191

Query: 161 ASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDG 220
              +++   KTA L  A+ ++GA+L  A   V  A+  YG+++G AFQL+DD++      
Sbjct: 192 DECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRP 251

Query: 221 DEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEILAA----ME 276
           +  GK V  DL   K TLP+ + + HG      +    +++    +  ++ LAA    +E
Sbjct: 252 EITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAVAELIE 311

Query: 277 QTGSLQYTIEKALHEADKAIAELAILPESEYKQA-LITLAHMAVNR 321
             G  ++   +A     + I  +A +   +   A L  LAH  V+R
Sbjct: 312 CGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDR 357