Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Polyprenyl synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  172 bits (437), Expect = 8e-48
 Identities = 101/326 (30%), Positives = 175/326 (53%), Gaps = 10/326 (3%)

Query: 6   IQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGS- 64
           ++A  A ++ ++N+T+ A++     L+  +  +++  GGKRLRPLL +L+A+ALG +G  
Sbjct: 4   LKAYLATELPRINKTLDAEVAVLHPLVRPVAEHVLRAGGKRLRPLLTLLTARALGAEGGG 63

Query: 65  --------HHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIY 116
                        A  +E +H+ATLLHDD++D +DLRRG   A+  FG   +VL GD + 
Sbjct: 64  LFRKSSGPDLYPLACSVELLHSATLLHDDILDGADLRRGLPAAHTMFGQTETVLAGDALL 123

Query: 117 TRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFE 176
             + +++   G  ++ + +++A+   A GE+ ++ +    D    +Y+ +I  KTA +  
Sbjct: 124 ALANRIVARYGDARLTETIAEAIVQTATGEIVEIAHQRSTDHGHDTYIDIITGKTAWMLR 183

Query: 177 AATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKP 236
           A+ ++GA+   A  E   A   +G  LG AFQ++DD +D+ +   + GK VG DL EGK 
Sbjct: 184 ASCELGALAAQAPDEAVQAAAGFGLNLGIAFQIVDDALDFAASSKDTGKPVGGDLREGKL 243

Query: 237 TLPLLYAMQHGNP-EQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKA 295
           T PL+Y ++   P E+ A +    +     + + E+ A +   G    T + A    DKA
Sbjct: 244 TPPLIYYLETLTPQERDAFVTRFRQGTFDDATVAEVAADLRARGCDAKTRQLAASYLDKA 303

Query: 296 IAELAILPESEYKQALITLAHMAVNR 321
            A L  LP++  ++ L       +NR
Sbjct: 304 SACLDALPDTPERRILRQSIDYVLNR 329