Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

 Score =  147 bits (372), Expect = 3e-40
 Identities = 88/313 (28%), Positives = 165/313 (52%), Gaps = 10/313 (3%)

Query: 14  MAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFI 73
           ++K++  +   +  D  L      +++  GGKR+RP L++L+      + +     A  +
Sbjct: 8   LSKIDSELKKYMEKDTKLYGA-SKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSV 66

Query: 74  EFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSM---- 129
           E IH  TL+HDD++D  D RRG  T +  +G   ++L GD +Y ++F+ ++ +       
Sbjct: 67  ELIHNYTLVHDDIMDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAH 126

Query: 130 KILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDAS 189
           ++LK++S A   + EG+ +  M   +   T   Y+++I  KT  L  A  +IGA++ D +
Sbjct: 127 EVLKVLSKACVEVCEGQTED-MEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMADCT 185

Query: 190 PEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNP 249
           PE   A+ NY K +G  FQ+ DDV+D   D   +GK VG D+ EGK T+ +++AM++ + 
Sbjct: 186 PEEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSE 245

Query: 250 EQAAMIREAIEKANGMSRLNEILAAME-QTGSLQYTIEKALHEADKAIAELAILPESEYK 308
           ++   + + +   N  +   E+  A+E    S+ Y  +   +  ++A   L I  ++E +
Sbjct: 246 DKKERLLQIL--GNQDANQQEVAEAIELLADSINYAKDTMKNATEEAKDYLKIF-DAEKR 302

Query: 309 QALITLAHMAVNR 321
           + L  +A   + R
Sbjct: 303 KNLENIADFIIER 315