Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., octaprenyl-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  431 bits (1108), Expect = e-125
 Identities = 210/322 (65%), Positives = 267/322 (82%)

Query: 1   MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALG 60
           MD  AI+ L   DM  VN+ I+ QL SDV+LINQLGFYII+GGGKRLRPLL+VL+A+A+ 
Sbjct: 1   MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVD 60

Query: 61  YQGSHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSF 120
           YQG  H   AA IEFIHTA+LLHDDVVDES LRRG+ TANA FGN+ASVLVGDF+YTRSF
Sbjct: 61  YQGEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSF 120

Query: 121 QMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQ 180
           QMMTEL SM++L++++D  NV+AEGEV QLMNCNDPDTTE SYM+VIY KTA+LFEAAT 
Sbjct: 121 QMMTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATL 180

Query: 181 IGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPL 240
           + A+L  ASPE E A+ +YGKYLGTAFQL DD++DYT+D DE+GKN+GDDLAEGKPTLPL
Sbjct: 181 LAAVLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPL 240

Query: 241 LYAMQHGNPEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELA 300
           +YA+ HG  E+  +IR+AIE+ +G   + +I+AA+   G+L YT +KA+ E++KAIA L+
Sbjct: 241 IYAIAHGTEEEKQLIRQAIEQGDGTHAIEKIVAALHHCGALNYTQQKAIEESNKAIAALS 300

Query: 301 ILPESEYKQALITLAHMAVNRS 322
           +LP+S++K ALI+LA ++V+R+
Sbjct: 301 VLPDSDFKTALISLAKISVDRN 322