Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., geranyltranstransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (248), Expect = 6e-26
 Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 12/242 (4%)

Query: 43  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100
           GGKR+RP L     +  G         AA IE IH  +L+HDD+  +D+  LRRG+ T +
Sbjct: 42  GGKRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVH 101

Query: 101 AAFGNAASVLVGDFIYTRSFQMMTEL-------GSMKILKLMSDAVNV--IAEGEVQQLM 151
            AF  A ++L GD + T +F+++TE          + +++ ++ A     +  G+   L 
Sbjct: 102 IAFDEATAILAGDALQTLAFEIVTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLA 161

Query: 152 NCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLID 211
           +  D      +  Q+   KT  L   A ++  I  +A  +    M  +   +G AFQ+ D
Sbjct: 162 S-TDKHIDLKALTQLHNMKTGALISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQD 220

Query: 212 DVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEI 271
           D++D  +  +E+GK  G D    K T P L  +Q        +I+EA+     +   +++
Sbjct: 221 DILDIIATTEELGKPQGSDAESNKSTFPQLLGLQGAKDTATQLIQEALSALAKLPYNSQL 280

Query: 272 LA 273
           +A
Sbjct: 281 IA 282