Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., (2E,6E)-farnesyl diphosphate synthase from Klebsiella michiganensis M5al

 Score =  105 bits (263), Expect = 1e-27
 Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 1   MDF-KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKAL 59
           MDF + +QA      A +   I  Q   +  L+  + +  + GG KRLRP L   +    
Sbjct: 1   MDFPQQLQACVEQANAALRRFIAPQPFQNTPLVEAMQYGALLGG-KRLRPFLVYATGDMF 59

Query: 60  GYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYT 117
           G   +     AA +E IH  +L+HDD+  +D+ DLRRG+ T +  FG A ++L GD + T
Sbjct: 60  GVSRATLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQT 119

Query: 118 RSFQMMTELGSMKI-----LKLMSDAVNV-----IAEGEVQQLMNCNDPDTTEASYMQVI 167
            +F ++++    ++     L ++S+         +  G+   L          AS  ++ 
Sbjct: 120 LAFSILSDAPMAEVPDRDRLAMISELAQASGIAGMCGGQALDL-EAEGHQVDLASLERIH 178

Query: 168 YSKTARLFEAATQIGAILC-DASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKN 226
             KT  L  AA ++GA+   DA      A+  Y + +G AFQ+ DD++D   D   +GK 
Sbjct: 179 RHKTGALIRAAVRMGALSAGDAGRRALPALDRYAENIGLAFQVQDDILDVVGDTATLGKR 238

Query: 227 VGDDLAEGKPTLPLLYAMQHGNPEQAAMIREA 258
            G D   GK T P L  ++    +   +I +A
Sbjct: 239 QGADQQLGKSTYPALLGLEQARKKAHDLITDA 270