Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Polyprenyl synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  233 bits (595), Expect = 4e-66
 Identities = 131/313 (41%), Positives = 188/313 (60%), Gaps = 2/313 (0%)

Query: 11  ANDMAKVNETIHAQLNSD-VSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA 69
           A DM  VN  I  ++ S+    I ++  +++  GGKRLRP+L + +A+  GY G +H   
Sbjct: 20  AEDMDAVNVLIRERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLATARLCGYTGPYHVHL 79

Query: 70  AAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSM 129
           AA +EFIHTATLLHDDVVDES+ RRG+ TAN  + N +SVLVGD+++ RSFQ+M E GS+
Sbjct: 80  AATVEFIHTATLLHDDVVDESNQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMVETGSL 139

Query: 130 KILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDAS 189
           ++L ++++A   IAEGEV QL    D  T E  Y++V+  KTA LF AAT++G ++  A 
Sbjct: 140 RVLDILANAAATIAEGEVLQLSAAQDLATDEDIYLKVVRGKTAALFSAATEVGGVIAGAD 199

Query: 190 PEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNP 249
                A+  YG  LG AFQ++DD++DY  D  + GKN+GDD  E K TLP++ A+   + 
Sbjct: 200 EAQVRALFTYGDALGIAFQIVDDLLDYGGDSTKTGKNIGDDFRERKLTLPVIKAVAKADL 259

Query: 250 EQAAMIREAIEKANGM-SRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAILPESEYK 308
           E+ A     IEK +     L   LA +++ G++  T   A+  A +A A L  +      
Sbjct: 260 EERAFWSRVIEKGDQRDGDLEHALALLDRHGAMAATRADAVAYAAQAKAALEAVAPHPLT 319

Query: 309 QALITLAHMAVNR 321
             L  LA   V R
Sbjct: 320 DMLRDLADYVVAR 332