Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., putative isoprenyl synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  125 bits (314), Expect = 1e-33
 Identities = 76/217 (35%), Positives = 116/217 (53%), Gaps = 3/217 (1%)

Query: 38  YIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKA 97
           YI+S GGKR+RP+L +++        S     A  IE  H  TLLHDD++D SD+RRGK 
Sbjct: 33  YILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPATGIEVYHNHTLLHDDLMDRSDMRRGKP 92

Query: 98  TANAAFGNAASVLVGDFIYTRSFQMMTELGS---MKILKLMSDAVNVIAEGEVQQLMNCN 154
           T +  + +  ++L GD +   +F+ +         +++ L S     I EG+   +   +
Sbjct: 93  TVHKVWNDNTAILSGDTMLILAFRYVAGCAPEHLKEVIDLFSLTALEICEGQQLDMEFES 152

Query: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214
             D  E  Y+++I  KTA L  A+ +IGAIL  AS      + N+G  +G AFQL DD++
Sbjct: 153 RNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGASAADAENLYNFGMQIGVAFQLQDDLL 212

Query: 215 DYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQ 251
           D   D +  GK +G D+   K T  L+ A++  N EQ
Sbjct: 213 DVYGDPEVFGKKIGGDILCNKKTYMLIKALERANGEQ 249