Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., Ethanolamine permease from Pseudomonas fluorescens FW300-N2E2

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 78/337 (23%), Positives = 146/337 (43%), Gaps = 21/337 (6%)

Query: 5   LGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAVNK 64
           LG   L  + +G +I    F         A  L  ++   +  +       SF  L    
Sbjct: 11  LGTLHLWGIAVGLVISGEYFGWSYGWGT-AGTLGFLVTALMVALMYTCFIFSFTELTTAI 69

Query: 65  PHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIFGS 124
           PH   G F ++R  FG+  G  +        + A  +  + + + L + F   D  +   
Sbjct: 70  PHAG-GPFAYSRRAFGEKGGLIAGIATLIEFVFAPPAIAMAIGAYLNVQFPELDPKL--- 125

Query: 125 GNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWSTFS 184
                +  GA ++   ++ L   GV  AA   L+ T+  +  LL+F+      F++S F 
Sbjct: 126 -----AAVGAYIIFMTLNIL---GVSIAAAFELVVTVLAVAELLVFMGVVAPGFSFSNFV 177

Query: 185 LD-FAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQ-RKDIGRATILGLLT 242
           L+ +AG +  S A + G + A +   +W F+ IEGA + +  A+  ++ I RA + G+LT
Sbjct: 178 LNGWAGSNEFSLASIPG-IFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPRAYVSGILT 236

Query: 243 ALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIG---PWGKYIIAVGLLISVCGAF 299
            + + + V +++ GV     L+   +P + Q +  ++G    W   ++ +G L  +  +F
Sbjct: 237 LVFLAIGVMIMAGGVGDWRTLSNINDP-LPQAMKAVVGNDSTWMHMLVWIG-LFGLVASF 294

Query: 300 LSWTVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNAL 336
               +  S   F  A+    PR  AK ++  +P  A+
Sbjct: 295 HGIILGYSRQFFALARAGYLPRGLAKLSRFQTPHRAI 331



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 48/187 (25%), Positives = 72/187 (38%), Gaps = 54/187 (28%)

Query: 6   GLGSLTALVIGSMIGAGVFS-----------LPQNMAAVA---SPLAVMIGWSITGIGMI 51
           G+ +L  L IG MI AG              LPQ M AV    S    M+ W    IG+ 
Sbjct: 233 GILTLVFLAIGVMIMAGGVGDWRTLSNINDPLPQAMKAVVGNDSTWMHMLVW----IGLF 288

Query: 52  FLALSFQYLAVNKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLG 111
            L  SF  +          + G++R+ F                 +A   YL    + L 
Sbjct: 289 GLVASFHGI----------ILGYSRQFFA----------------LARAGYLPRGLAKLS 322

Query: 112 LLFDTPDQIIFGSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFI 171
             F TP + I   G     IG A     A++S  L  +Q   L   + TM+    ++++I
Sbjct: 323 R-FQTPHRAILAGG----VIGIA-----AIYSDGLVNLQGMTLTAAMITMSVFGAIVMYI 372

Query: 172 VSAIAAF 178
           +S ++ F
Sbjct: 373 ISMLSLF 379