Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Arginine/ornithine antiporter ArcD from Pseudomonas fluorescens FW300-N2E2

 Score =  437 bits (1123), Expect = e-127
 Identities = 228/470 (48%), Positives = 313/470 (66%), Gaps = 12/470 (2%)

Query: 4   KLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAVN 63
           KL LG+L ALV+GSMIG G+FSLPQNMAA A   AV+IGW+IT +GM+ LA  FQ LA  
Sbjct: 7   KLRLGALVALVVGSMIGGGIFSLPQNMAASADVGAVLIGWAITAVGMLTLAFVFQTLANR 66

Query: 64  KPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIFG 123
           KP ++ GV+ +A+ GFGD+ GF SAWGYW SA + NV Y V++FSTLG  F      +FG
Sbjct: 67  KPDLDGGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFP-----VFG 121

Query: 124 SGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWSTF 183
            GNT  ++ G+S+LLWAVH LVLRG++ AA INL+TT+ K+VPL+LF++ A+ AF    F
Sbjct: 122 EGNTVAAVIGSSVLLWAVHFLVLRGIKEAAFINLVTTIAKVVPLVLFVLIAVFAFKLDIF 181

Query: 184 SLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQRKDIGRATILGLLTA 243
           + D  GL +     +L QV+  ML+TVWVF+GIEGA + S+RA +R D+G+AT++G +T 
Sbjct: 182 TADIWGLKNPDLGSVLNQVRNMMLVTVWVFIGIEGASIFSARAEKRTDVGKATVIGFITV 241

Query: 244 LSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSWT 303
           L   VLV +LS+G++   +LA+  NPSMA VL  ++G WG  +I+VGL+IS+ GA LSW 
Sbjct: 242 LLFLVLVNVLSLGIMTQPELAKLQNPSMAAVLEHVVGHWGAVLISVGLIISLLGALLSWV 301

Query: 304 VLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLIF 363
           +L +E  F AAKD   P    ++N    P NAL+LT   +Q+ L++  +++STY SL+  
Sbjct: 302 LLCAEIMFAAAKDHTMPEFLRRENANHVPANALWLTNAMVQLFLVITLFSASTYLSLIYL 361

Query: 364 ASEMILVPYFLVGAFTLKLALE-------QRDRGKLLLIGFGATAYGLWLLYASGLHYLM 416
           A+ MILVPY    A+ + LA+          +R K L+IG  A  Y +WLLYA G+ YL+
Sbjct: 362 ATSMILVPYLWSAAYAVLLAVRGETYEGFAAERRKDLIIGAVALIYAVWLLYAGGIKYLL 421

Query: 417 LSTLLYVPGFAFYLKAKREQGVKAFCGREMVGASTLLLFAVGAAGMLWQG 466
           LS LLY PG   + KAKRE G   F   E +  + ++  A+ AA  L+ G
Sbjct: 422 LSALLYAPGAILFAKAKRELGKPIFTSVEKLIFAAVIAGALVAAYGLYDG 471