Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Arginine/ornithine antiporter ArcD from Pseudomonas fluorescens FW300-N2E2

 Score =  440 bits (1132), Expect = e-128
 Identities = 238/471 (50%), Positives = 314/471 (66%), Gaps = 12/471 (2%)

Query: 3   KKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAV 62
           +KL LG+L ALV+GSMIG G+FSLPQNMAA A   AV+IGW+IT IGM+ LA  FQ LA 
Sbjct: 6   EKLPLGALIALVVGSMIGGGIFSLPQNMAARADVGAVLIGWAITAIGMLTLAFVFQTLAN 65

Query: 63  NKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIF 122
            KP +NSGV+ +A+ GFGD+ GF SAWGYW SA + NV Y V++FSTLG  F      +F
Sbjct: 66  RKPQLNSGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFP-----VF 120

Query: 123 GSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWST 182
           G GNT  +IG ASLLLWAVH LVLRG+Q AA INL+TT+ K+VPLL+F+V A  AF    
Sbjct: 121 GQGNTPVAIGCASLLLWAVHFLVLRGIQEAAFINLVTTVAKVVPLLMFVVMAAVAFKAEV 180

Query: 183 FSLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQRKDIGRATILGLLT 242
           F+ D  G  +     ++ QV+  ML+TV+VF+GIEGA V S+RA +R D+GRAT++G L 
Sbjct: 181 FTRDIWGAMNPDLGSVMDQVRNMMLVTVFVFIGIEGASVYSARAERRADVGRATVIGFLG 240

Query: 243 ALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSW 302
            L++ VLV +LS+GV+   +LAQ  NPS+A VL  I+GPWG  +I++GL +S+ GA LSW
Sbjct: 241 VLALLVLVNVLSLGVMSQRELAQLQNPSLAGVLEHIVGPWGALLISLGLAVSLLGALLSW 300

Query: 303 TVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLI 362
            +L +E  +  A+DK  P    K+N   +PVNAL+LT   IQ+ L++  +++ TY SL+ 
Sbjct: 301 ALLCAEILYATARDKTMPAFLTKENANRAPVNALWLTNGMIQLFLLITLFSAGTYTSLIY 360

Query: 363 FASEMILVPYFLVGAFTLKLAL--EQRDRG-----KLLLIGFGATAYGLWLLYASGLHYL 415
            AS MILVPY    A+ + L    E  ++G     K L IG  A  Y +WLLYA G+ YL
Sbjct: 361 LASSMILVPYLWSAAYAVLLCARGETYEQGSARRMKDLCIGGVALCYAVWLLYAGGVKYL 420

Query: 416 MLSTLLYVPGFAFYLKAKREQGVKAFCGREMVGASTLLLFAVGAAGMLWQG 466
           +LS LLY PG   + +AKREQG   F   E    + ++  A GAA  L+ G
Sbjct: 421 LLSALLYAPGVILFAQAKREQGQPLFTHVEKGVFACVMAGAGGAAYGLYSG 471