Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., Arginine/ornithine antiporter ArcD from Pseudomonas fluorescens FW300-N2E2

 Score =  431 bits (1108), Expect = e-125
 Identities = 231/476 (48%), Positives = 321/476 (67%), Gaps = 24/476 (5%)

Query: 3   KKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAV 62
           ++L L  L ALV+GSMIG+G+FSLPQNMAA A   A++IGW ITG+GM+ LAL +Q L+ 
Sbjct: 30  RRLSLSLLIALVVGSMIGSGIFSLPQNMAASAGAGAILIGWLITGVGMLSLALVYQTLSN 89

Query: 63  NKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIF 122
            +P +++GVF +AR   G+F GF SAWGYW SA + NVSYLVI+F+ L   F      +F
Sbjct: 90  RQPELDNGVFAYARALGGEFLGFNSAWGYWISAWIGNVSYLVILFAALSYFFP-----VF 144

Query: 123 GSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWST 182
           G GN   +I GAS++LWA+H ++LRG++TAA  N +TT+ K+VPLLLFI   IAAF+  T
Sbjct: 145 GEGNNKAAIVGASVVLWALHWMILRGMRTAAKANALTTIAKVVPLLLFIGLVIAAFSKDT 204

Query: 183 FSLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQRKDIGRATILGLLT 242
           F +DF G   +     L QVK+TML+TVWVF+GIEGA V S+RA +R D+GRAT++G + 
Sbjct: 205 FMVDFWGTPALGST--LDQVKSTMLVTVWVFIGIEGANVFSARAAERADVGRATVIGFIL 262

Query: 243 ALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSW 302
            L + + V+LLS+G+++  +LA   NPSMA VL  + GPWG  +I++GL++SV GA L+W
Sbjct: 263 TLMLLIAVSLLSLGILRQPELAALKNPSMAGVLEAVAGPWGAVLISIGLIVSVGGALLAW 322

Query: 303 TVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLI 362
           T+LA+E+ F  AK+K+ PR  A +NQ G+P NAL++T  CIQ+ L+L  Y+S++Y +L+ 
Sbjct: 323 TLLAAESVFTPAKEKVMPRLLATENQHGAPANALWITNGCIQLFLLLTLYSSASYLALIS 382

Query: 363 FASEMILVPYFLVGAFTLKLALEQR----DRG---KLLLIGFGATAYGLWLLYASGLHYL 415
            A+ MIL+PY   G + LK+  + +     RG   + + I   AT Y +WLLYA+G  Y+
Sbjct: 383 LATSMILLPYLFSGLYALKMTWQGQTYAGHRGLQLRDMAIAVVATGYCVWLLYAAGPRYM 442

Query: 416 MLSTLLYVPGFAFYLKAKREQGVKAFCGREMVGASTLLLFAVGAAG-----MLWQG 466
           +LS LLY PG   YL A+R     A  GR + G    LL  + AA      MLW G
Sbjct: 443 LLSALLYAPGSLIYLSAQR-----ARTGRALTGFGWGLLLVIWAAAIFAGWMLWSG 493