Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Arginine/ornithine antiporter ArcD from Pseudomonas fluorescens FW300-N1B4

 Score =  432 bits (1111), Expect = e-125
 Identities = 233/471 (49%), Positives = 312/471 (66%), Gaps = 12/471 (2%)

Query: 3   KKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAV 62
           +KL LG+L ALV+GSMIG G+FSLPQNMAA A   A++IGW+IT +GM+ LA  FQ LA 
Sbjct: 6   QKLRLGALIALVVGSMIGGGIFSLPQNMAARADAGAILIGWAITAVGMLTLAFVFQTLAN 65

Query: 63  NKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIF 122
            KP ++SGV+ +A+ GFGD+ GF SAWGYW SA + NV Y V++FSTLG  F       F
Sbjct: 66  RKPELDSGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPA-----F 120

Query: 123 GSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWST 182
           G GNT  +IG AS+LLWAVH LVLRG++ AA IN +TT+ K+VPL++FIV A  AF    
Sbjct: 121 GQGNTPIAIGCASVLLWAVHFLVLRGIKEAAFINQLTTVAKIVPLIMFIVIAAVAFKADI 180

Query: 183 FSLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQRKDIGRATILGLLT 242
           F+ D  G  + +   ++ QV+  ML+TV+VF+GIEGA V S+RA++R D+GRAT++G + 
Sbjct: 181 FTRDIWGRSNPNFGGVMDQVRNMMLVTVFVFIGIEGASVYSARAQKRSDVGRATVIGFIG 240

Query: 243 ALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSW 302
            L++ VLV LLS+G++   +LA   NPS+A VL  I+GPWG  +I++GL IS+ GA LSW
Sbjct: 241 VLALLVLVNLLSLGIMSQPELATLQNPSLAAVLEHIVGPWGALLISIGLAISLLGALLSW 300

Query: 303 TVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLI 362
            +L +E  F  AKDK  P    K+N    PVNAL+LT + IQ+ L++  +++ TY SL+ 
Sbjct: 301 ALLCAEILFATAKDKTMPAFLKKENANHVPVNALWLTNVMIQIFLLITLFSAGTYTSLIY 360

Query: 363 FASEMILVPYFLVGAFTLKLA-------LEQRDRGKLLLIGFGATAYGLWLLYASGLHYL 415
            AS MILVPY    A+ + L+           +R K LLIG  A  Y +WLLYA G+ YL
Sbjct: 361 LASSMILVPYLWSAAYAVLLSGRGETYEHASAERTKDLLIGGIALCYAVWLLYAGGVKYL 420

Query: 416 MLSTLLYVPGFAFYLKAKREQGVKAFCGREMVGASTLLLFAVGAAGMLWQG 466
           +LS LLY PG   + +AKREQG   F   E    S ++  A  AA  L+ G
Sbjct: 421 LLSALLYAPGVILFAQAKREQGKPLFTLMEKGIFSCVVAGAGLAAYGLYSG 471