Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., inner membrane protein YjeH (RefSeq) from Shewanella loihica PV-4

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 96/410 (23%), Positives = 172/410 (41%), Gaps = 27/410 (6%)

Query: 13  LVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAVNKPHVNSGVF 72
           L+  +++G GVF LP+   A A   A ++ W +  + +I + L F  LA   PH  +G  
Sbjct: 16  LMATTLLGTGVFILPEMTIATAGSGA-LLAWILLTLAIIPVTLVFARLAGVFPHA-AGPA 73

Query: 73  GFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIFGSGNTWWSIG 132
            F  + FG  AG  +   +     +   + +++ F  +  L              W  + 
Sbjct: 74  YFVEKAFGRTAGRTTGLIFLLVVPIGTPAAILMTFQFINALVPLVG---------WQQLM 124

Query: 133 GASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWSTFSLDFAGLHH 192
               LL  + +L L+G+Q +A +    T+     ++  +V    A       L+ A    
Sbjct: 125 TELALLLLLLALNLKGIQVSAKLQFALTLA----IVSVVVILFGAGGAKLGDLELAAPQ- 179

Query: 193 ISGADLLGQVKATMLITVWVFVGIEGAV-VVSSRARQRKDIGRATILGLLTALSIYVLVT 251
            +G+D+ G V A   I  W F+GIE    + +   R  KD+  A I+G +    +YV  T
Sbjct: 180 -AGSDM-GLVMAAAGIAFWSFLGIEAMTHLANDFKRPDKDMLPAMIIGTILVGLVYVTCT 237

Query: 252 LLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSWTVLASEAPF 311
           LL + V +   LA      M      ++G +G  +I +  +         +T   +   +
Sbjct: 238 LLLLFVPKGEGLA------MVTAFDHLLGGYGAQVIGILGIAGGLSTVNVYTASVARLIW 291

Query: 312 LAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLIFASEMILVP 371
             +++ + PR+F K NQ   PV AL    L +   + L        + L+ + + + ++ 
Sbjct: 292 SFSREGVLPRYFDKLNQHRVPVRALVAVLLTMATVICLTYLLGQELEHLIAWTNGVFVLI 351

Query: 372 YFLVGAFTLKLALEQRDRGKLLLIGFGATAYGLWLLYASGLHYLMLSTLL 421
           Y LV        L +R    L+++G          L A+ L+ LML ++L
Sbjct: 352 Y-LVSMLAAARLLSKRYL-PLVIMGVAFCLAMAVALGANMLYALMLVSVL 399