Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., inner membrane protein YjeH (RefSeq) from Shewanella oneidensis MR-1

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 103/425 (24%), Positives = 188/425 (44%), Gaps = 39/425 (9%)

Query: 13  LVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAVNKPHVNSGVF 72
           L+  +++G GVF LPQ M    +    +I WS+  + +I +AL F  LA   PH  +G  
Sbjct: 20  LMATTLLGTGVFILPQ-MTIAKAHAGALIAWSLLTLAIIPVALIFGRLASVFPHA-AGPA 77

Query: 73  GFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIFGSGNTWWSIG 132
            F  + FG  AG      +     +   + +++ F  +  L            + W+ + 
Sbjct: 78  YFVEKAFGRTAGRTIGLIFLLVVPMGAPAAILMTFQFVNALIPL---------DGWFKVS 128

Query: 133 GASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWSTFSLDFAGLHH 192
              L+++ +  L LRG+Q +A +    T+  +V +++ +  A +       SL   G   
Sbjct: 129 AEVLVIFGLFLLNLRGIQVSAKLQFGLTLC-IVAIVVVLFGASSLQPGHLTSLASYGTPE 187

Query: 193 ISGADLLGQVKATMLITV----WVFVGIEGAVVVSSRARQ-RKDIGRATILGLLTALSIY 247
           IS          TM+I      W F+GIE    ++   R+ ++D+  A ++G +    IY
Sbjct: 188 IS----------TMMIAAGIAFWSFLGIEAMTHLADDFRRPQQDMIPAMMMGTVLVGIIY 237

Query: 248 VLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSWTVLAS 307
           V  TL+ + V   N +A      M  V   ++G +G  +I V  + S       +   A+
Sbjct: 238 VACTLILLLVPTDNSVA------MIGVFDALLGGYGAQVIGVLGIASGLATVNVYAASAA 291

Query: 308 EAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLIFASEM 367
              +  + + + PR FA +N+ G P+ AL      +   ++L   T    + L+ +++ +
Sbjct: 292 RLVWSFSCEGILPRCFAVKNRHGVPIRALGALLSVMASVIVLTHITGQELEHLIAWSNGV 351

Query: 368 ILVPYFLVGAFTLKLALEQRDRGKLLLIGFG-ATAYGLWLLYASGLHYLMLSTLLYVPGF 426
            +V Y +      KL    R    L+++G G   A G+  L AS  + L+L  +L+V  F
Sbjct: 352 FVVIYLMAMLAAAKLL--PRHNLPLVVLGCGFCLALGI-ALGASMAYVLVL--ILFVAPF 406

Query: 427 AFYLK 431
            ++ K
Sbjct: 407 LWWQK 411