Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., putrescine-ornithine antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (280), Expect = 2e-29
 Identities = 101/445 (22%), Positives = 194/445 (43%), Gaps = 42/445 (9%)

Query: 2   DKKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLA 61
           + K+G+  LT + I +M+G+G+  LP  +A V +    ++ W +T  G   LA +F    
Sbjct: 5   ENKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGT--ISVLSWLVTAAGSTALAFAFAKCG 62

Query: 62  VNKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFD---TPD 118
           +     + G+ G+A   FG    F + + Y  S ++ANV+  +       +L +   +P 
Sbjct: 63  MFSKK-SGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLSPM 121

Query: 119 QIIFGSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAF 178
            I   +      IG    +LW        G +    ++ +T    ++P++      ++  
Sbjct: 122 AICLAT------IG----VLWLATVANFGGARITGRVSSVTVWGIILPVI-----GVSLI 166

Query: 179 NWSTFSLD-FAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRA-RQRKDIGRAT 236
            W  F +D + G  +         +  ++ +T+W F+G+E A   S       K++  A 
Sbjct: 167 GWFWFDIDLYKGAWNPHDMPFFKALGGSIAMTLWAFLGLESACANSEAVDNPEKNVPIAV 226

Query: 237 ILGLLTALSIYVLVTLLSMGVIQVNQLAQYPNP---SMAQVLTTIIGPWGKYIIAVGLLI 293
           + G L A  IY++ T +  G++   +LA    P   + AQ+   ++G     I+    +I
Sbjct: 227 MGGTLGAALIYIVSTNVIAGIVPNAELASSNAPFGLAFAQMFNPVVGK----IVMACAII 282

Query: 294 SVCGAFLSWTVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYT 353
           S  G+ L W    ++    +A +  FP+ FAK ++A +P+  +   T+ + +  +L   T
Sbjct: 283 SCTGSLLGWQFTIAQVFKASADEGFFPKVFAKVSKADAPIWGM---TIIVSIQTLLSLMT 339

Query: 354 -----SSTYDSLLIFASEMILVPYFL----VGAFTLKLALEQRDRGKLLLIGFGATAYGL 404
                S  +++L+  A    +VPY L    +G    +L +         +I      Y  
Sbjct: 340 ISPSLSKQFEALVNLAVVTNIVPYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSF 399

Query: 405 WLLYASGLHYLMLSTLLYVPGFAFY 429
           + LY+SG   +ML  +    G+  Y
Sbjct: 400 YALYSSGETAVMLGAIATFFGWTIY 424