Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., L-proline transporter (from data) from Caulobacter crescentus NA1000

 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 96/435 (22%), Positives = 185/435 (42%), Gaps = 34/435 (7%)

Query: 1   MDKKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYL 60
           + K L    L AL +G+++G G+++L    A +A P  V++ + I G      AL +  L
Sbjct: 30  LKKTLSWPHLVALGVGAIVGTGIYTLTGVGAGLAGP-GVILSFLIAGAVCACAALCYAEL 88

Query: 61  AVNKPHVNSGVFGFAREGFGD----FAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDT 116
           +   P  +   + ++    G+    F G+     Y        V +         ++   
Sbjct: 89  STMIP-ASGSAYTYSYAAMGEPVAWFVGWSLILEYTLVCAAVAVGWSAHAHGLFKMI-GF 146

Query: 117 PDQIIFGSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIA 176
           PD ++ G          A  +  AV  L+  G + +A +N++    K++ L++F+V  + 
Sbjct: 147 PDALLAGPHQGGLINMPAVFISMAVAGLLALGTRESATVNMVLVFVKIIALIVFVVLCLP 206

Query: 177 AFN---WSTFSLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQRKDIG 233
           AFN   ++ F  +    H   GA         M     +F    G   VS+ A + K+  
Sbjct: 207 AFNLAHFTPFMPNGFQAHVPEGAAADAAKVGVMAAASLIFFAFYGFDAVSTAAEETKNPK 266

Query: 234 RATILGLLTAL----SIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAV 289
           R   +G++ ++    +IY++V  +S+G  +    ++   P +  +L ++       ++A+
Sbjct: 267 RDLTIGIVGSMAVCTAIYMIVAAVSIGASRTEVFSKSEAP-LVFILESLNHGKIAQLVAL 325

Query: 290 GLLISVCGAFLSWTVLASEAPFLAAKDKMFPRHFAKQN-QAGSPVNALFLT-TLCIQVSL 347
             +I++    L++    S   F+ A+D + PR  +K N + G+PV    LT  L   +S 
Sbjct: 326 AAVIALPTVILAFMYGQSRIFFVMARDGLLPRALSKVNAKTGTPVMMTLLTGVLAAVISG 385

Query: 348 ILVRYTSSTYDSLLIFASEMILVPYFLVGAFTLKLALEQRDRGKLLLIGFGATAYGLWLL 407
           +L      +   +   A+   L  +  VGA  + L L + +R ++        +  LW +
Sbjct: 386 LL------SLKDIAELANAGTLWAFIAVGASVILLRLREPNRPRVF-------STPLWPI 432

Query: 408 YAS----GLHYLMLS 418
            A     G  YL LS
Sbjct: 433 VAPAGILGCLYLFLS 447