Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., inner membrane protein YjeH (RefSeq) from Shewanella sp. ANA-3

 Score = 87.8 bits (216), Expect = 6e-22
 Identities = 99/422 (23%), Positives = 186/422 (44%), Gaps = 33/422 (7%)

Query: 13  LVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAVNKPHVNSGVF 72
           L+  +++G GVF LPQ M    +    +I WS+  + +I +AL F  LA   PH  +G  
Sbjct: 16  LMATTLLGTGVFILPQ-MTIDKAQAGALIAWSLLTLAIIPVALIFGRLASVFPHA-AGPA 73

Query: 73  GFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIFGSGNTWWSIG 132
            F  + FG  AG      +     +   + +++ F  +  L            + W  +G
Sbjct: 74  YFVEKAFGRTAGRTIGLIFLLVVPMGAPAAILMTFQFVNALIPL---------DGWPKVG 124

Query: 133 GASLLLWAVHSLVLRGVQTAALINL-ITTMTKMVPLLLFIVSAIAAFNWSTFSLDFAGLH 191
              L+++ +  L LRG+Q +A +   +T     + +LLF  S++   + ++ +       
Sbjct: 125 AEVLVIFGLFLLNLRGIQVSAKLQFGLTLCIVAIVVLLFGASSVQPGHLTSLAS------ 178

Query: 192 HISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQ-RKDIGRATILGLLTALSIYVLV 250
              G   +  +     I  W F+GIE    ++   R+ ++D+  A ++G +    IYV  
Sbjct: 179 --YGTPEIPTIMIAAGIAFWSFLGIEAMTHLADDFRRPQQDMIPAMMMGTVLVGIIYVAC 236

Query: 251 TLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSWTVLASEAP 310
           TL+ + V     +A      M  V   ++G +G  +I V  + S       +   A+   
Sbjct: 237 TLILLLVPTDKSVA------MIGVFDALLGGYGAQVIGVLGIASGLATVNVYAASAARLI 290

Query: 311 FLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLIFASEMILV 370
           +  + + + PR FA +N+ G P+ AL      +   ++L   T    + L+ +++ + +V
Sbjct: 291 WSFSNEGILPRCFAVKNRHGVPIRALAALLSVMACVIVLTHTTGQELEHLIAWSNGVFVV 350

Query: 371 PYFLVGAFTLKLALEQRDRGKLLLIGFG-ATAYGLWLLYASGLHYLMLSTLLYVPGFAFY 429
            Y +      KL    R    L+++G G   A G+  L AS  + L+L  +L+V  F ++
Sbjct: 351 IYLMAMLAAAKLL--PRSNLPLVVLGCGFCLALGI-ALGASMAYVLVL--ILFVAPFLWW 405

Query: 430 LK 431
            K
Sbjct: 406 QK 407