Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., TRAP transporter solute receptor, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

 Score =  149 bits (377), Expect = 7e-41
 Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 10/315 (3%)

Query: 15  MGAIAAAVIGSGVASAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGG 74
           + A AA V+ +   +A  +I I TG  +GVYYP G  + ++ +   +D   + SV++T  
Sbjct: 10  LAAAAALVVSTTAQAAPVYINILTGGTSGVYYPIGVGLSQIYSSGIQD--AKTSVQATKA 67

Query: 75  SIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARAD 134
           S+ N+N +++G  +  +   D      NG  +   + P  KLRA+   +     I+A  +
Sbjct: 68  SVENLNLLQAGRGELALALGDSVADAKNGVEDAGFKAPLTKLRAIAGAYPNYIQIVASQE 127

Query: 135 SGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNK 194
           SGI+ + DL GK V++G   SG     + +  A G      K+   L  +E    + + +
Sbjct: 128 SGIKTLADLKGKTVSVGAAKSGTELNARAIFKAAGLTYQDMKV-QYLPFAESVDLIKNRQ 186

Query: 195 IDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAGMYSGTDQE 254
           +DA +   G    AI++  ++ A   V      +EKI   NP Y  +++PA  Y G  + 
Sbjct: 187 LDATLQSSGLGMAAIRDLASTMALSYVAVPTDVVEKI--GNPAYQSAMIPANTYDGQAEA 244

Query: 255 VKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVTAGNSIP-- 312
           V +  +   LVT E+V + V Y +TK +FEN    TRL  + +  K   +  A  ++P  
Sbjct: 245 VPTVAITNILVTREDVPDEVAYQMTKLLFEN---LTRLGTSHSAAKDITLKNAAKNLPIA 301

Query: 313 LHPGAVKYYKEAGLI 327
           LHPGA +YYKE G +
Sbjct: 302 LHPGAERYYKEVGAL 316