Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., alpha-ketoglutarate TRAP transporter, solute receptor component (from data) from Pseudomonas stutzeri RCH2

 Score =  170 bits (431), Expect = 4e-47
 Identities = 106/323 (32%), Positives = 166/323 (51%), Gaps = 7/323 (2%)

Query: 7   MSLPKIIKMGAIAAAVIGSGVA-SAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNI 65
           M L K + + A AAA   S  A +A  FI I TG  +GVYYP G A+ +  NK       
Sbjct: 1   MRLTKRLGLLAAAAAFTASTAAVAAPTFINILTGGTSGVYYPIGVALSQQYNKI---DGA 57

Query: 66  RCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTE 125
           + SV++T  S+ N+N +++G  +      D     +NG  +   + P K+LRA+   +  
Sbjct: 58  KTSVQATKASVENLNLLQAGRGELAFSLGDSVEDAWNGVEDAGFKAPLKRLRAIAGTYNN 117

Query: 126 PFNIIARADSGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSE 185
              I+A A+SGI+ + DL GKR+++G P SG     + +  A G +         L  +E
Sbjct: 118 YIQIVASAESGIKTLDDLKGKRISVGAPKSGTELNARAIFKAAGLDYKDMGRVEFLPYAE 177

Query: 186 RSQALCDNKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPA 245
             + + + ++DA +   G    AI++  ++     V      +EKI   +  Y   V+PA
Sbjct: 178 SVELIKNRQLDATLQSSGLGMAAIRDLASTMPVTFVEIPAEVVEKI--ESDAYLAGVIPA 235

Query: 246 GMYSGTDQEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMV 305
           G Y G D +V +  +   LVT E+VS+ V Y +TK +F+N       H A  ++K E+  
Sbjct: 236 GTYDGQDADVPTVAITNILVTHEKVSDEVAYQMTKLMFDNLAALGNAHSAAKDIKLEN-A 294

Query: 306 TAGNSIPLHPGAVKYYKEAGLIK 328
           T    IPLHPGA ++YKEAG++K
Sbjct: 295 TKNLPIPLHPGAERFYKEAGVLK 317