Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., TAXI family TRAP transporter solute-binding subunit from Rhodopseudomonas palustris CGA009

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 88/324 (27%), Positives = 131/324 (40%), Gaps = 25/324 (7%)

Query: 17  AIAAAVIGSGVASAQDFITIGTGSVTGVYYPTGGA---ICKLVNKDRKD-HNIRCSVEST 72
           A+  A+I +  A A D     T + T   Y TG A   I   V K  KD H     V   
Sbjct: 12  AVGCALITTTAARADDIKLPTTMAFTA--YDTGTAGFNIAVAVGKMMKDKHGTDVRVLPA 69

Query: 73  GGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFA--EQGPYKKLRAVFSMHTEPFNII 130
           G  +  +  +R+G      + S   Y    G  EF   E GP      +  +     ++ 
Sbjct: 70  GNDVARLAPLRNGRAQLAWMGSG-TYFAQEGVFEFGAKEWGPQPLQITLSVVDCNGSSLG 128

Query: 131 ARADSGIENVKDLAGKRVN--IGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQ 188
             AD G++ VKDL GKRV   +G+P     A    +M   G   D  K+          +
Sbjct: 129 VAADIGVKEVKDLRGKRVGFVVGSPALNQNALG--IMAYGGLTKDDVKIVEFASYGAMWK 186

Query: 189 ALCDNKIDAFIYMVGHPNGAIKEATTSCAAKLVP----ATGPEIEKIVANNPYY--AYSV 242
            L +N +DA         G  +EA +S    + P    A     E++    P++  A S 
Sbjct: 187 GLVNNDVDAAFGTT--ITGPAREAESSPRGLIWPPMPHADKAAWERVKKVAPFFNPAMSS 244

Query: 243 VPAGMYSGTDQEVKSFGVA-ATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKK 301
             A    G   E+ ++    AT+  T+   +  VY++TKA+  ++D +    P    L  
Sbjct: 245 CGAAHQPGKPIELSNYPYPIATVYATQSADQ--VYSITKAMIVDYDAYKDNAPGATGLAV 302

Query: 302 EDMVTAGNSIPLHPGAVKYYKEAG 325
           +   T    +P HPGAVK  KEAG
Sbjct: 303 KTQ-TMKWVVPFHPGAVKALKEAG 325