Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., TAXI family TRAP transporter solute-binding subunit from Rhodopseudomonas palustris CGA009

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 69/320 (21%), Positives = 123/320 (38%), Gaps = 42/320 (13%)

Query: 26  GVASAQDFITIGTGSVTGVYYPTGGAICKLVNK-----DRKDHNIRCSVESTGGSIYNVN 80
           G+ASA  +  +   ++     P  G   KL+        R+ + +R     T G   +  
Sbjct: 26  GIASAGYYFAMRPVTLKIAVGPQAGDDYKLIQALTQVFARERNTVRLRPVVTDGPAASAL 85

Query: 81  TIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARAD------ 134
            ++SG +D  +++ D                  K+ ++V  +H     + A A       
Sbjct: 86  ALKSGAVDLAVIRGDLPVP--------------KQAQSVAVLHKNVAVLWAPASQQPKGK 131

Query: 135 ------SGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQ 188
                 +GI  + DL GKRV +      +   + V++  +G +    +    +  +E + 
Sbjct: 132 RKGSKTAGIAGITDLTGKRVGVVGRTEANAGLLTVILQQYGVDPSKVQ-TLSVPVAEVAD 190

Query: 189 ALCDNKIDAFIYMVGHPN----GAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVP 244
           A+   K+DA +   G  N    G    AT     + V  +    E + AN+P Y  + +P
Sbjct: 191 AVRTGKVDALL-AAGPLNSKIIGDAVAATAHTGREPVFLSIESSEALAANHPSYEAASIP 249

Query: 245 AGMYSGT----DQEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLK 300
           AG + G     D EVK+   +  +V  E  S+  +   T+ +F          P  A ++
Sbjct: 250 AGAFGGAPARPDNEVKTVSFSHYIVAREGASDTTIATFTEQLFTARQIVIGEVPLAAKIE 309

Query: 301 KEDMVTAGNSIPLHPGAVKY 320
             D       IP+ PGA  Y
Sbjct: 310 TPD-TDKDAVIPVQPGAAAY 328