Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., TRAP transporter solute receptor, TAXI family from Phaeobacter inhibens DSM 17395

 Score =  428 bits (1100), Expect = e-124
 Identities = 196/316 (62%), Positives = 250/316 (79%)

Query: 13  IKMGAIAAAVIGSGVASAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVEST 72
           + + A+ A    +  A A++FITIGTG VTGVYYPTGGAIC+LVNK RK+H IRCSVEST
Sbjct: 6   LAVSALVATAFMAPAAMAEEFITIGTGGVTGVYYPTGGAICRLVNKTRKEHGIRCSVEST 65

Query: 73  GGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIAR 132
           GGS+YN+NTIR GEL+FG+ QSDWQYH YNGTS+F EQG ++ LRAVFS+H EPF ++AR
Sbjct: 66  GGSVYNINTIREGELEFGVAQSDWQYHAYNGTSKFEEQGAFEGLRAVFSVHPEPFTVVAR 125

Query: 133 ADSGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCD 192
           AD+G+ +  DL GKRVNIGNPGSG R TM+V+++A GW  D+F LA ELK +E+S ALCD
Sbjct: 126 ADAGVTSFDDLKGKRVNIGNPGSGQRGTMEVLLEAKGWGMDAFALATELKAAEQSAALCD 185

Query: 193 NKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAGMYSGTD 252
           N+IDA +Y VGHP+G+I+EATT+C + LV   G  +EK++A+N +Y  + +P GMY G+D
Sbjct: 186 NQIDAMVYTVGHPSGSIQEATTACDSVLVTVDGEAVEKLIADNSFYRTATIPGGMYRGSD 245

Query: 253 QEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVTAGNSIP 312
            +V +FGV AT VT+++VS+  VY + KAVFENFD F +LHPAFANLK E+M TAG S P
Sbjct: 246 ADVGTFGVGATFVTSDQVSDEAVYTVVKAVFENFDDFKKLHPAFANLKPEEMATAGLSAP 305

Query: 313 LHPGAVKYYKEAGLIK 328
           LHPGA KYYKE G ++
Sbjct: 306 LHPGAAKYYKEQGWVE 321