Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., TRAP-type uncharacterized transport system, periplasmic component from Dechlorosoma suillum PS

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 60/295 (20%), Positives = 119/295 (40%), Gaps = 22/295 (7%)

Query: 34  ITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGGSIYNVNTI--RSGELDFGI 91
           + +  G+ +G YY  G    +++ ++     I   V ++ GS  N+  +  +  +++  +
Sbjct: 45  VVMSAGADSGAYYAFGKKYAEILARN----GITLEVRTSNGSAENLQRLLDKDSDVEIAL 100

Query: 92  VQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARADSGIENVKDLAGKRVNIG 151
           VQ   +        ++ E+     L ++ SM+ EP  +  R++  +E +  LAGKR+ +G
Sbjct: 101 VQGGVEAP----RPDYLEEDEALPLSSLGSMYYEPVWVFYRSERELERLHQLAGKRIAVG 156

Query: 152 NPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNKIDAFIYMVGHPNGAIKE 211
             GSG R     ++ A     D  K    L G + ++ L   ++DA   +       ++ 
Sbjct: 157 AEGSGIRGLALQLLAANEVPVDG-KHLLSLGGLKAAEELQQGRLDAAFVIAAPEAPVVQV 215

Query: 212 ATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAG----MYSGTDQEVKSFGVAATLVTT 267
              S   K++     + E      PY +  V+P G    + +    +       A LV  
Sbjct: 216 LLRSPGIKVM--NFAQAEAYTRRFPYLSKIVLPEGAVDLVRNFPPHDTTLLAATANLVVH 273

Query: 268 EEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVTAGNSIPLHPGAVKYYK 322
           + +  A+   L +A  E           F   + +       S+P+   A +YYK
Sbjct: 274 DSLHPAIQSLLLQAASE-----VHGKAGFFQRRGDFPAVRDQSLPVADTAERYYK 323