Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., immunogenic-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  150 bits (380), Expect = 3e-41
 Identities = 92/311 (29%), Positives = 154/311 (49%), Gaps = 5/311 (1%)

Query: 17  AIAAAVIGSGVASAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGGSI 76
           A+  ++  + +A+A  FI I TG  +GVYYP G A+ +L     +    + SV++T  S+
Sbjct: 13  ALTLSLSAATMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIE--GAKTSVQATKASV 70

Query: 77  YNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARADSG 136
            N+N +++G  +  +   D     Y G ++   + P  K+R + + +     I+A  +SG
Sbjct: 71  ENLNLLQAGRGELALALGDSVAAAYQGDADAGFKKPLDKVRVLAAAYPNYIQIVASKESG 130

Query: 137 IENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNKID 196
           I+ + DL GKR+++G P SG     + +  A G + +       L  +E  + + + ++D
Sbjct: 131 IKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEFLPYAESVELIKNRQLD 190

Query: 197 AFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAGMYSGTDQEVK 256
           A +   G    AI++  T+     V      I KI  NNP Y + V+PA  Y G   +V 
Sbjct: 191 ATLQSSGLGMAAIRDLATTMPINFVEVPEDVILKI--NNPAYQHGVIPASTYEGQTADVS 248

Query: 257 SFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVTAGNSIPLHPG 316
           +  +    VT   VS+ + Y +TK +FE+ D     H A A   + D  T     PLHPG
Sbjct: 249 TVAIQNLFVTQTGVSDDLAYQMTKLMFEHLDRLGNAHSA-AKAIQLDKATKNLPAPLHPG 307

Query: 317 AVKYYKEAGLI 327
           A +Y+KE G +
Sbjct: 308 AERYFKEVGAL 318