Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score = 44.7 bits (104), Expect = 5e-09
 Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 23/179 (12%)

Query: 34  ITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGGSIYNVNTIRSGE--LDFGI 91
           ITI  G     ++        ++ +D     I+  +  TGGS+ N+  +   +  +D G 
Sbjct: 59  ITIAAGPKDSNFWRVAERYKTILARD----GIKLDIVETGGSLDNLKRLVDSDQDIDVGF 114

Query: 92  VQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARADS---------GIENVKD 142
           VQ      G  G       G    L ++ S+   P ++  R+ S          +  + +
Sbjct: 115 VQG-----GLAGAVPADAMG---SLVSLGSISYVPVSVYYRSASINAEGKPIPPLRQLSE 166

Query: 143 LAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNKIDAFIYM 201
           LAGKR+ IG  GSG       ++ A G           + G E +QAL   KIDA   M
Sbjct: 167 LAGKRIAIGGQGSGSSVLAATLLKANGVEAGGATQLLNIGGDEAAQALTSGKIDAAFLM 225