Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., TRAP transporter solute receptor, TAXI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 9/268 (3%)

Query: 65  IRCSVESTGGSIYNVNTIRSGELDF--GIVQSDWQYHGYNGTSEFAEQGPY--KKLRAVF 120
           I   V +TG +  ++    +G +DF  G    +W      G  +  E  P   + +  +F
Sbjct: 52  IELQVSATGTATRHMMDAATGRVDFLFGAPTINWMMVNRLGPFQHFETAPALEQNVGMIF 111

Query: 121 SMHTEPFNIIARADSGIENVKDLAGKRVNIGNP-GSGDRATMQVVMDAFGWNNDSFKLAA 179
           +    P++ I RA SGIE++ DL  + V  G P G+     ++V+  + G      KL A
Sbjct: 112 AYQMGPYHYITRAGSGIESLADLRSRTVFAGPPGGAATEVVLRVIEQSTGITPGEMKLQA 171

Query: 180 ELKGSERSQALCDNKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYA 239
                   QA  D KID  +     P+ A+++   +   +L+      +  I A     A
Sbjct: 172 -FGFDAAIQAFQDGKIDVIVLPTNLPSAAVQQFALTSRIRLLDVDLRNV-TIRAETGGTA 229

Query: 240 YSVVP--AGMYSGTDQEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFA 297
             + P   G     D   ++ G          V E VVY +T+A++EN            
Sbjct: 230 NEIPPDAYGPNQVNDTATRTHGSIVNFSAGMHVPEHVVYEVTRAIWENLGDIHSAADWMP 289

Query: 298 NLKKEDMVTAGNSIPLHPGAVKYYKEAG 325
                +M  +  S  LHPGA +YY+EAG
Sbjct: 290 GTITPEMALSLVSGRLHPGAERYYREAG 317