Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., TRAP transporter solute receptor, TAXI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 81.6 bits (200), Expect = 3e-20
 Identities = 83/262 (31%), Positives = 118/262 (45%), Gaps = 19/262 (7%)

Query: 20  AAVIGSGVASAQDFI-TIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGGSIYN 78
           A ++GSG  +AQ+F   I TG  TG Y   G  I  LV++  +  N+   VES G S+ N
Sbjct: 17  ALLLGSGAVAAQEFEKNILTGGPTGTYIQIGRDISNLVDQCGQTLNV---VESAG-SLEN 72

Query: 79  VNTIRSGEL-DFGIVQSD-WQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARADSG 136
              +R      FGIVQSD  +Y      S+         +R  F ++ E  +++A  D  
Sbjct: 73  FLGVRQRRATQFGIVQSDVLEYLKTYSASDQNIARAIAGVRIAFPLYNEEVHLLATRD-- 130

Query: 137 IENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNKID 196
           I    DLAGKRV IG   SG   T  + +D      D+ +L      +  +Q L   +ID
Sbjct: 131 ITTPADLAGKRVAIGVRDSGTFLTASLFLDLL--EVDAGELLTIGPDAAMAQLLA-GEID 187

Query: 197 AFIYMVGHPNGAIKEATTSC-AAKLVPATGPEIEKIVANNPYYAYSVVPAGMYSGTDQEV 255
           AF Y+ G P     E         LVP   P +E +      Y  S +PAG Y+   + V
Sbjct: 188 AFFYVAGAPTRLFSETEIDANRFHLVPVDDPLLEAV------YLPSEIPAGTYAFQAEPV 241

Query: 256 KSFGVAATLVTTEEVSEAVVYN 277
               V A L+T E + +   Y+
Sbjct: 242 PVVAVKAVLMTYEYIPQRNAYH 263