Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, solute receptor component (from data) from Dinoroseobacter shibae DFL-12

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 14/312 (4%)

Query: 17  AIAAAVIGSGVASAQD----FITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVEST 72
           A++A V+ +  A  +D      T+GT S  G Y+  G     LV ++     +    E T
Sbjct: 14  ALSATVVTTATAQDRDGWPDSFTVGTASQGGTYFAYGSGWANLVAEEL---GLSGGGEVT 70

Query: 73  GGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIAR 132
           GG + N+  + +G+  FG+           GT+  A         A+F M+  PF++ A 
Sbjct: 71  GGPMQNMALVHTGDAQFGMTTMGPAAESLAGTNPIAPGLQMDNACAMFPMYQTPFSVTAL 130

Query: 133 ADSGIENVKDLA-GKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALC 191
           + SGI ++ D+  G ++  G  GS        +M+A G N +          S+    L 
Sbjct: 131 SSSGIASIADIPDGAKIGFGPAGSTSDTYFPRMMEALGVNFE----RRNGGWSDLGGQLQ 186

Query: 192 DNKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAGMYSGT 251
           D  +D   +  G P  A+ +        ++  T  E  KI+A+ P   +S + AG YS  
Sbjct: 187 DGLLDVIAFAAGVPVPAVSQLEVQTDINIIEFTEEEQAKIMADFPVSEFS-IGAGTYSTL 245

Query: 252 DQEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVTAGNSI 311
           + + +S  +    +   ++  + V   T  V  +      +H A  +   E+       +
Sbjct: 246 EADARSVSMWNFAIANCDLPASFVKAATDVVMSDNARMVGIHKAARSTLPENW-DKNKVL 304

Query: 312 PLHPGAVKYYKE 323
             HPGA +++KE
Sbjct: 305 KWHPGAAEWFKE 316