Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 37/121 (30%), Positives = 62/121 (51%)

Query: 208 FVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTF 267
           FVL GA++   G     +  A  ++G +RGG +   + AS   G +SGSS+A+  + G+ 
Sbjct: 61  FVLAGAIMAEGGMARRLVAFAGVLVGFVRGGLSLVNITASTFFGAISGSSLADTASVGSV 120

Query: 268 TIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAAILPAL 327
            IP M++ G+P   + AV ++ S    LTPP   +  + +     +S   +  A I P L
Sbjct: 121 LIPEMEKKGYPREFSTAVTISGSVQALLTPPSHNSVIYSLAAGGTVSIAALFVAGIGPGL 180

Query: 328 I 328
           +
Sbjct: 181 L 181



 Score = 35.0 bits (79), Expect = 9e-06
 Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 7/132 (5%)

Query: 500 TDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTA 559
           ++L   L    R +  + +  A A +   ++TL  I   +T     +S    ++++    
Sbjct: 263 SELPRMLHRTVRTLSIVMILIAFAASFGYIMTLMQIPSKITTAFLALSDNRYVILMCINF 322

Query: 560 VISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPPV 619
           ++ L+LG  +      ++++ ++ PV+V+ G +      ++ V+L +   G++   TPPV
Sbjct: 323 ML-LVLGTLMDMAPLILILTPILLPVVVSFGVDPVHFGMIMLVNLGI---GLI---TPPV 375

Query: 620 GLAAFAAAAIAK 631
           G   F  AAI K
Sbjct: 376 GAVLFVGAAIGK 387