Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., C4-dicarboxylate ABC transporter permease from Azospirillum brasilense Sp245

 Score =  362 bits (930), Expect = e-104
 Identities = 237/700 (33%), Positives = 359/700 (51%), Gaps = 101/700 (14%)

Query: 28  LPGRVLWFVPLCWSLFQLWYASPLPFIFDFGVLNDTQARSIHLTFAVFLAFTAYPAMK-- 85
           L G+++  + +  SLF  + A        FG+L + + R IHL+F + L F  +P  K  
Sbjct: 27  LAGKLVGGLLIILSLFHYYTAG-------FGLLPEMEHRGIHLSFVLGLVFLVFPFTKRG 79

Query: 86  -GSPRDR-------IPLTDWLLALAGSFSAAYIYLF-YAELAGRSGAPTQFDVIASVVGM 136
            G P          I L DW LA+    +  ++ L    +LA R G PT  DVI   + +
Sbjct: 80  YGEPVMGTLLRPLGIGLQDWALAIGAVVAVMHVPLIPLDDLAFRVGNPTTTDVILGSILI 139

Query: 137 VLLLEATRRALGPPLMMVAALFLLYTFAGPYMPDVIAHKGASLNKAMSHLWLTTEGVFGV 196
           ++LLEATRR++G PL +++ +F+ Y   GP MP ++ H GA++++ + HL+LTT+GV+G+
Sbjct: 140 IVLLEATRRSVGWPLPIISLIFMSYAIWGPQMPGLLKHPGATVSQLVDHLYLTTQGVYGI 199

Query: 197 ALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGS 256
           ALGV  ++VF FVLFG    R G G  F+  A  + G   GGPAK A+  S L G++SGS
Sbjct: 200 ALGVVATYVFHFVLFGVFATRIGLGQLFLDCAAWVAGRYAGGPAKVAIFGSALFGMISGS 259

Query: 257 SIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYV 316
           S+AN VT G+ TIP MKR+G+    A AVE  AST GQ+TPPIMGAAAFLM+E++G+ Y 
Sbjct: 260 SVANTVTVGSLTIPAMKRMGYKPHFAAAVESTASTGGQITPPIMGAAAFLMIEFLGLPYT 319

Query: 317 EVIKAAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISA 376
            +I AAI+PA + +  ++  VH EA + G+ GL       + +       T++ L V+  
Sbjct: 320 TIIMAAIVPAFMHFFGVLVQVHFEAKRNGLRGLRPDEMPDLKEAFRRDWPTVIPLVVLIG 379

Query: 377 VVYYGIGWTKEAFGDAATPILTVVLLAAYVGLVKISAPYAKEGLGIDENLQYVPDVAPTL 436
           ++  G            TP      +AA+ G+    A     GL        + +V   L
Sbjct: 380 ILIAGY-----------TP-----YMAAFWGITLCIA----VGLLNPRKRMTIWEVLDGL 419

Query: 437 KSGLHYLLPIVVLVWCLTVERFSPGLSAFWASVFMIFILLTQRPLMALFNRTGSLGDAAK 496
           + G  Y L +              G +A    + +  + LT                   
Sbjct: 420 RDGAKYALAV--------------GAAAATVGIIVGVVTLT------------------- 446

Query: 497 EGVTDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLI 556
            GV   +  +V+     + +       G +     LT                 L+  LI
Sbjct: 447 -GVGFKISYIVTSTAGEMAVWAGAFLPGWLADAKALT-----------------LLFTLI 488

Query: 557 FTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDT 616
            T V+ +++G G+PTTANYI+++T+ AP +  LG     + P++A H FVFY+G+LAD T
Sbjct: 489 MTGVVCILMGCGIPTTANYIIMATIAAPALGLLG-----VAPIVA-HFFVFYYGVLADIT 542

Query: 617 PPVGLAAFAAAAIAKSDPIRTGIQGFAYDIRTAILPFMFVFNTQLLLMGID-SWWHLMLT 675
           PPV LAA+AAA +A +DP +TG   F   +  A++PF+FVF+  LLL+    +W    + 
Sbjct: 543 PPVALAAYAAAGMAGADPFKTGNTAFRLGLAKALVPFVFVFSPSLLLVAPGFNWPDFFIA 602

Query: 676 ILSSITAMLLFSAATQGWWLTKTKWWE-----VVALLVLT 710
            L  I  ++   A   GW LT  + WE     + A+L++T
Sbjct: 603 FLGCIVGIVCLGATLTGWLLTNMRGWERLLLGIAAILLVT 642