Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP dicarboxylate transporter, DctM subunit from Pseudomonas syringae pv. syringae B728a

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 41/121 (33%), Positives = 64/121 (52%)

Query: 208 FVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTF 267
           FVL GA++   G     +  A  ++G +RGG +   +VAS   G +SGSS+A+  + G+ 
Sbjct: 61  FVLAGAIMAEGGMSRRLVAFAAVLVGFVRGGLSLVNIVASTFFGAISGSSVADTASVGSV 120

Query: 268 TIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAAILPAL 327
            IP M+R G+P   + AV V+ S    LTPP   +  + +     +S   +  A ILP L
Sbjct: 121 LIPEMERNGYPRDFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGILPGL 180

Query: 328 I 328
           +
Sbjct: 181 L 181



 Score = 37.0 bits (84), Expect = 2e-06
 Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 7/131 (5%)

Query: 501 DLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTAV 560
           DL + +   AR +  + +    A +   ++TL  I + +T     +S    ++++    +
Sbjct: 264 DLPKLMHRAARTISIVMILIGFAASFGYILTLMEIPMKITTAFLTLSDNRYVILMCINVM 323

Query: 561 ISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPPVG 620
           + L+LG  +      ++++ ++ PVIV +G +      ++ V+L +   G++   TPPVG
Sbjct: 324 L-LLLGTVMDMAPLILILTPILLPVIVGVGIDPVHFGMIMLVNLGI---GLI---TPPVG 376

Query: 621 LAAFAAAAIAK 631
              F  AA+ K
Sbjct: 377 AVLFVGAAVGK 387